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Journal of
Agricultural,
Biological, and
Environmental
Statistics


A journal of applied statistics.
Published by the American Statistical Association and the International Biometric Society.

Journal of Agricultural, Biological, and Environmental Statistics, Vol. 3, No. 3, pp. 335–345
Analysis of Genotype-by-Environment Interaction Using the Additive Main Effects and Multiplicative Interaction Model and Stability Estimates
Bahman Shafii and William J. Price

Understanding the implication of genotype-by-environment (GE) interaction structure is an important consideration in plant breeding programs. A significant GE interaction for a quantitative trait such as yield can seriously limit efforts in selecting superior genotypes for both new crop introduction and improved cultivar development. Traditional statistical analyses of yield trials provide little or no insight into the particular pattern or structure of the GE interaction. The Additive Main Effects and Multiplicative Interaction (AMMI) statistical model incorporates both additive and multiplicative components of the two-way data structure which can account more effectively for the underlying interaction patterns. Integrating results obtained from biplot graphic displays with those of the genotypic stability analysis enables clustering of genotypes based on similarity of response and the degree of stability in performance across diverse environments. The AMMI model is presented, and its usage in diagnosing the GE interaction structure is discussed. Tai's regression-based stability statistics are employed to determine the stability of genotypes tested. Empirical applications are demonstrated using data from a national winter rapeseed variety trial.

Key Words
Biplot analysis; Genotype-by-environment interaction; Genotypic stability; Yield trials.

Bahman Shafii is Director, and William J. Price is Research Associate, Statistical Programs, College of Agriculture, University of Idaho, Moscow, ID 83843-2337.


Copyright © 2007 American Statistical Association and the International Biometric Society.
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Copyright © 1998 American Statistical Association and the International Biometric Society. All rights reserved.