Logo

JABES Home Page

Electronic Access 2001 - current issue

2000 Contents and Abstracts

1999 Contents and Abstracts

1998 Contents and Abstracts

1997 Contents and Abstracts

Information for JABES Authors

Data and Program Archive

Papers to Appear

Guide for Referees

JABES Editorial Board

JABES Contact
Information


American Statistical Association Publications

Subscription Information

Journal of
Agricultural,
Biological, and
Environmental
Statistics


A journal of applied statistics.
Published by the American Statistical Association and the International Biometric Society.

Journal of Agricultural, Biological, and Environmental Statistics, Vol. 2, No. 4, pp. 370–388
Using Mean Similarity Dendrograms to Evaluate Classifications
John Van Sickle

Mean similarity dendrograms are introduced as a new graphical tool for evaluating classifications based on sample data from replicate objects within each of the proposed classes. The dendrograms compare the mean similarities between objects within the same class to the mean similarity between objects in different classes. They were designed to complement multidimensional scaling plots and permutation tests of class structure. The dendrograms offer a concise picture of the overall strength of a classification as well as the compactness and isolation of individual classes. Although broadly applicable, the dendrograms were motivated by a need for easily communicated assessments of land classifications that are intended to serve as geographic frameworks for environmental research and management. The dendrograms and other similarity-based tools are applied to a single-factor classification of fish communities sampled along a 281-km section of the Willamette River in the state of Oregon (U.S.). In a second example, the tools are used to evaluate a two-factor classification of fish communities sampled in wadeable streams of Oregon's Cascade Mountains and Willamette Valley. The dendrograms help to assess the relative classification strengths of the two factors, factor interactions, and an alternative classification derived from cluster analysis.

Key Words
Classification; Cluster analysis; Ecoregions; Fish communities; Multidimensional scaling; Ordination; Permutation tests.

John Van Sickle is Staff Scientist, Dynamac International, Inc., 200 SW 35th Street, Corvallis, OR 97331.


Copyright © 2007 American Statistical Association and the International Biometric Society.
All rights reserved.

Copyright © 1997 American Statistical Association and International Biometric Society. All rights reserved.